# HG changeset patch # User greg # Date 1493404440 14400 # Node ID 4fbae9f0cc6f2b341037c63e445f6d083f7ab129 # Parent e4a17900f1a569704bcdeaf3ae7ced219ae65d04 Uploaded diff -r e4a17900f1a5 -r 4fbae9f0cc6f gene_family_classifier.xml --- a/gene_family_classifier.xml Fri Apr 28 13:58:34 2017 -0400 +++ b/gene_family_classifier.xml Fri Apr 28 14:34:00 2017 -0400 @@ -279,8 +279,6 @@ * **Custom selection configuration** - select ‘Yes’ to enable selection of a single copy configuration file. Scaffold configuration templates (.singleCopy.config) of how to customize single/low-copy orthogroups selection can be found in the scaffold data installed into Galaxy via the PlantTribes Scaffolds Download Data Manager tool, and also available at the PlantTribes GitHub `repository`_. Single/low-copy settings shown in these templates are used as defaults if ‘No’ is selected. -.. _repository: https://github.com/dePamphilis/PlantTribes/tree/master/config - * **Custom selection file** - select a single/low-copy customized configuration file from your history. * **Orthogroups fasta configuration** - select ‘Yes’ to create proteins orthogroups fasta files for the classified sequences. @@ -289,6 +287,8 @@ * **Coding sequences fasta file** - select coding sequences fasta file corresponding to the proteins fasta file from your history. +.. _repository: https://github.com/dePamphilis/PlantTribes/tree/master/config +