# HG changeset patch
# User greg
# Date 1487891225 18000
# Node ID 431a63fced688ecfd7c7929defec6a61130614bb
# Parent 21e1ee8b54bcdc9880a622128786501fb29d4fbb
Uploaded
diff -r 21e1ee8b54bc -r 431a63fced68 gene_family_classifier.xml
--- a/gene_family_classifier.xml Thu Feb 23 17:57:16 2017 -0500
+++ b/gene_family_classifier.xml Thu Feb 23 18:07:05 2017 -0500
@@ -117,16 +117,16 @@
#set out_file = $output_ptortho
#end if
&& mv $orthogroups_fasta_src_dir/* $orthogroups_fasta_dest_dir || true
- && echo -e "\n\nGalaxy - GeneFamilyClassifier Output\n\n\n\n\n" > $out_file
- && for f in "$orthogroups_fasta_dest_dir"/*; do if [ -f "$f" ]; then echo -e "- $f
\n" >> $out_file fi; done
+ && echo -e "\n\northogroups\n\n\n\n\n" > $out_file
+ && for f in "$orthogroups_fasta_dest_dir"/*; do if [ -f "$f" ]; then echo -e "- $f
\n" >> $out_file; fi; done
&& echo -e "
\n\n\n" >> $out_file
#end if
#if $single_copy_orthogroup:
#if $create_ortho_sequences:
&& mv $single_copy_fasta_src_dir/* $single_copy_fasta_dest_dir || true
- && echo -e "\n\nGalaxy - GeneFamilyClassifier Output\n\n\n\n\n" > $output_ptsco
- && for f in "$single_copy_fasta_dest_dir"/*; do if [ -f "$f" ]; then echo -e "- $f
\n" >> $output_ptsco fi; done
+ && echo -e "\n\nsingle copy orthogroups\n\n\n\n\n" > $output_ptsco
+ && for f in "$single_copy_fasta_dest_dir"/*; do if [ -f "$f" ]; then echo -e "- $f
\n" >> $output_ptsco; fi; done
&& echo -e "
\n\n\n" >> $output_ptsco
#end if
#end if