Mercurial > repos > greg > gene_family_classifier

diff gene_family_classifier.xml @ 102:5aaa248ffcb6 draft

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Uploaded
author greg
date Mon, 27 Feb 2017 11:07:50 -0500
parents 87d078898e14
children 66ed8be7cc9b
line wrap: on
line diff
--- a/gene_family_classifier.xml	Mon Feb 27 11:07:43 2017 -0500
+++ b/gene_family_classifier.xml	Mon Feb 27 11:07:50 2017 -0500
@@ -94,13 +94,16 @@
             #if $create_ortho_sequences:
                 #if $create_corresponding_coding_sequences:
                     --output_ptorthocs '$output_ptorthocs'
+                    --output_ptorthocs_dir '$output_ptorthocs.files_path'
                 #else:
                     --output_ptortho '$output_ptortho'
+                    --output_ptortho_dir '$output_ptortho.files_path'
                 #end if
             #end if
             #if $single_copy_orthogroup:
                 #if $create_ortho_sequences:
                     --output_ptsco '$output_ptsco'
+                    --output_ptsco_dir '$output_ptsco.files_path'
                 #end if
             #end if
         ]]>