Mercurial > repos > greg > gene_family_classifier

comparison gene_family_classifier.xml @ 24:93c2ac892a19 draft

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Uploaded
author greg
date Wed, 11 Jan 2017 13:32:57 -0500
parents 1d3e9e154750
children 9be4bb807c21
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23:1d3e9e154750 24:93c2ac892a19
57 #end if 57 #end if
58 #end if 58 #end if
59 #end if 59 #end if
60 60
61 --scaffold_dir "${GALAXY_DATA_INDEX_DIR}/plant_tribes/scaffolds" 61 --scaffold_dir "${GALAXY_DATA_INDEX_DIR}/plant_tribes/scaffolds"
62 --num_threads "\${GALAXY_SLOTS:-4}" 62 --num_threads \${GALAXY_SLOTS:-4}
63 --no_config_override
63 64
64 #if str($save_hmmscan_log_cond.classifier) == 'hmmscan' or str($save_hmmscan_log_cond.classifier) == 'both': 65 #if str($save_hmmscan_log_cond.classifier) == 'hmmscan' or str($save_hmmscan_log_cond.classifier) == 'both':
65 #if str($save_hmmscan_log_cond.save_hmmscan_log) == 'yes': 66 #if str($save_hmmscan_log_cond.save_hmmscan_log) == 'yes':
66 && mv geneFamilyClassification_dir/hmmscan.log $hmmscan_log 67 && mv geneFamilyClassification_dir/hmmscan.log $hmmscan_log
67 #else: 68 #else: