Mercurial > repos > greg > gene_family_classifier

comparison gene_family_classifier.xml @ 100:87d078898e14 draft

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author greg
date Mon, 27 Feb 2017 10:56:03 -0500
parents 4a7d5509da02
children 5aaa248ffcb6
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99:4a7d5509da02 100:87d078898e14
52 #set create_ortho_sequences = False 52 #set create_ortho_sequences = False
53 #set create_corresponding_coding_sequences = False 53 #set create_corresponding_coding_sequences = False
54 #end if 54 #end if
55 55
56 python $__tool_directory__/gene_family_classifier.py 56 python $__tool_directory__/gene_family_classifier.py
57 --proteins '$input' 57 --input '$input'
58 --scaffold '$scaffold.fields.path' 58 --scaffold '$scaffold.fields.path'
59 --method $method 59 --method $method
60 --classifier $save_hmmscan_log_cond.classifier 60 --classifier $save_hmmscan_log_cond.classifier
61 --config_dir '$scaffold.fields.path' 61 --config_dir '$scaffold.fields.path'
62 --num_threads \${GALAXY_SLOTS:-4} 62 --num_threads \${GALAXY_SLOTS:-4}