Mercurial > repos > greg > gene_family_classifier

comparison gene_family_classifier.xml @ 16:1cf39b1af248 draft

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author greg
date Thu, 05 Jan 2017 08:00:33 -0500
parents 9d4ec1102803
children cb7487bdab99
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15:9d4ec1102803 16:1cf39b1af248
46 && rm geneFamilyClassification_dir/hmmscan.log 46 && rm geneFamilyClassification_dir/hmmscan.log
47 #end if 47 #end if
48 #end if 48 #end if
49 #if $create_ortho_sequences: 49 #if $create_ortho_sequences:
50 && echo "Sequences classified into pre-computed orthologous plant gene family clusters: `ls $orthogroups_fasta_src_dir | wc -l` files" > $output 50 && echo "Sequences classified into pre-computed orthologous plant gene family clusters: `ls $orthogroups_fasta_src_dir | wc -l` files" > $output
51 && ls $orthogroups_fasta_src_dir >> $output
51 && mv $orthogroups_fasta_src_dir/* $dest_dir 52 && mv $orthogroups_fasta_src_dir/* $dest_dir
52 #end if 53 #end if
53 ]]> 54 ]]>
54 </command> 55 </command>
55 <inputs> 56 <inputs>