Mercurial > repos > greg > gene_family_classifier

comparison gene_family_classifier.xml @ 140:000b2401eae2 draft

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author greg
date Fri, 05 May 2017 09:32:14 -0400
parents 27cae07d715e
children 048fcfb76dfa
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139:ecab2858de03 140:000b2401eae2
2 <description>classifies gene sequences into pre-computed orthologous gene family clusters</description> 2 <description>classifies gene sequences into pre-computed orthologous gene family clusters</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements_gene_family_classifier" /> 6 <expand macro="requirements_gene_family_classifier" />
7 <expand macro="stdio" /> 7 <command detect_errors="exit_code">
8 <command>
9 <![CDATA[ 8 <![CDATA[
10 #if str($options_type.options_type_selector) == 'advanced': 9 #if str($options_type.options_type_selector) == 'advanced':
11 #set specify_super_orthogroups_cond = $options_type.specify_super_orthogroups_cond 10 #set specify_super_orthogroups_cond = $options_type.specify_super_orthogroups_cond
12 #set specify_super_orthogroups = $specify_super_orthogroups_cond.specify_super_orthogroups 11 #set specify_super_orthogroups = $specify_super_orthogroups_cond.specify_super_orthogroups
13 #set create_orthogroup_cond = $options_type.create_orthogroup_cond 12 #set create_orthogroup_cond = $options_type.create_orthogroup_cond