# HG changeset patch
# User greg
# Date 1504873991 14400
# Node ID 31f85a5aefc0b88a4b25681df3f6691c63281598
# Parent  cebcf6f7cff2f42611f8ae1ee87ff97e3904cffa
Uploaded

diff -r cebcf6f7cff2 -r 31f85a5aefc0 macros.xml
--- a/macros.xml	Wed Sep 06 09:52:43 2017 -0400
+++ b/macros.xml	Fri Sep 08 08:33:11 2017 -0400
@@ -114,6 +114,7 @@
                         <param name="iterative_realignment" type="integer" optional="true" min="0" label="Realignment iteration limit" />
                     </when>
                 </conditional>
+                <param name="output_pristine_alignments" type="boolean" truevalue="true" falsevalue="" checked="false" label="Output pristine (non-filtered, non-trimmed) alignemnts?"/>
             </when>
         </conditional>
     </xml>