Mercurial > repos > greg > gene_family_aligner

diff gene_family_aligner.xml @ 2:01c08c35d051 draft

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Uploaded
author greg
date Fri, 07 Apr 2017 13:19:26 -0400
parents 6accbd3a1449
children b52d29988df8
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--- a/gene_family_aligner.xml	Fri Apr 07 13:13:38 2017 -0400
+++ b/gene_family_aligner.xml	Fri Apr 07 13:19:26 2017 -0400
@@ -89,10 +89,10 @@
     </inputs>
     <outputs>
         <data name="output_ptortho" format="ptortho" label="Integrated gene family clusters on ${on_string}">
-            <filter>input_format_cond['input_format'] == 'ptortho' or (input_format_cond['input_format'] == 'ptorthocs' and input_format_cond['orthogroup_fna'] == 'no')</filter>
+            <filter>input_format_cond['input_format'] == 'ptortho' or (input_format_cond['input_format'] == 'ptorthocs' and input_format_cond['codon_alignments'] == 'no')</filter>
         </data>
         <data name="output_ptorthocs" format="ptorthocs" label="Integrated gene family clusters and corresponding coding sequences on ${on_string}">
-            <filter>input_format_cond['input_format'] == 'ptorthocs' and input_format_cond['orthogroup_fna'] == 'yes'</filter>
+            <filter>input_format_cond['input_format'] == 'ptorthocs' and input_format_cond['codon_alignments'] == 'yes'</filter>
         </data>
     </outputs>
     <tests>