Mercurial > repos > greg > extract_genomic_dna

changeset 10:59bb87024183 draft

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Uploaded
author greg
date Fri, 15 Jan 2016 08:44:00 -0500
parents 8cc00c5cf33e
children b9c52a655249
files extract_genomic_dna.xml
diffstat 1 files changed, 4 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/extract_genomic_dna.xml	Fri Jan 15 08:43:52 2016 -0500
+++ b/extract_genomic_dna.xml	Fri Jan 15 08:44:00 2016 -0500
@@ -1,6 +1,7 @@
 <tool id="Extract genomic DNA 1" name="Extract Genomic DNA" version="3.0.0">
     <description>using coordinates from assembled/unassembled genomes</description>
     <requirements>
+        <requirement type="package" version="0.7.1">bx-python</requirement>
         <requirement type="package" version="35x1">faToTwoBit</requirement>
     </requirements>
     <command>
@@ -30,10 +31,10 @@
         ]]>
     </command>
     <inputs>
-        <param name="input" type="data" format="gff,interval" label="Fetch sequences for intervals in" help="Supported formats are gff, interval">
+        <param name="input" type="data" format="gff,interval" label="Fetch sequences for intervals in">
             <validator type="unspecified_build" />
         </param>
-        <param name="interpret_features" type="select" label="Interpret features when possible" help="Applicable only when input dataset format is gff">
+        <param name="interpret_features" type="select" label="Interpret features when possible" help="Applicable only when input dataset format is in the gff family">
             <option value="yes">Yes</option>
             <option value="no">No</option>
         </param>
@@ -191,7 +192,7 @@
     <citations>
         <citation type="bibtex">
             @unpublished{None,
-            author = {},
+            author = {Guru Ananda,Greg Von Kuster},
             title = {None},
             year = {None},
             eprint = {None},