Mercurial > repos > greg > extract_genomic_dna
comparison extract_genomic_dna.xml @ 20:5e839bb29ba9 draft
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author | greg |
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date | Thu, 03 Mar 2016 14:59:51 -0500 |
parents | b212210c1808 |
children | 2b565382e469 |
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19:b212210c1808 | 20:5e839bb29ba9 |
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202 when generating the FASTA header with fields genome, chrom, start, end, strand (name) delimited by the | 202 when generating the FASTA header with fields genome, chrom, start, end, strand (name) delimited by the |
203 selected character. For example, selecting an underscore will produce a FASTA header like this: | 203 selected character. For example, selecting an underscore will produce a FASTA header like this: |
204 | 204 |
205 >mm9_53_550_+ test_chromosome | 205 >mm9_53_550_+ test_chromosome |
206 | 206 |
207 while selecting a vertical bar will produce a description like this: | 207 while selecting a vertical bar will produce a FASTA header like this: |
208 | 208 |
209 >mm9|53|550|+ test_chromosome | 209 >mm9|53|550|+ test_chromosome |
210 | 210 |
211 If strand is not defined, the default value is "+". | 211 If strand is not defined, the default value is "+". |
212 | 212 |
243 | 243 |
244 </help> | 244 </help> |
245 <citations> | 245 <citations> |
246 <citation type="bibtex"> | 246 <citation type="bibtex"> |
247 @unpublished{None, | 247 @unpublished{None, |
248 author = {Guru Ananda}, | 248 author = {Guru Ananda, Greg Von Kuster}, |
249 title = {None}, | 249 title = {None}, |
250 year = {None}, | 250 year = {None}, |
251 eprint = {None}, | 251 eprint = {None}, |
252 url = {http://www.bx.psu.edu/~anton/labSite/} | 252 url = {http://www.bx.psu.edu/~anton/labSite/} |
253 }</citation> | 253 }</citation> |