# HG changeset patch # User greg # Date 1509730438 14400 # Node ID a0d57df923d2ca7b0220aa27a194a66611495867 # Parent 2b6708bc939187848df05cf40eda3dd86d3dfeb2 Uploaded diff -r 2b6708bc9391 -r a0d57df923d2 dmri.py --- a/dmri.py Fri Nov 03 13:30:34 2017 -0400 +++ b/dmri.py Fri Nov 03 13:33:58 2017 -0400 @@ -25,16 +25,16 @@ shutil.move(source_entry, destination_directory) if remove_source_dir: os.rmdir(source_directory) - -input_dir = 'input_dir' -# Get input data. -fetch_sherbrooke_3shell() -# MNove inputs to working directory. source_dir = os.path.abspath(os.path.join('home', 'greg', '.dipy', 'sherbrooke_3shell')) -move_directory_files(source_dir, input_dir) -fdwi = os.path.join(input_dir, 'HARDI193.nii.gz') -fbval = os.path.join(input_dir, 'HARDI193.bval') -fbvec = os.path.join(input_dir, 'HARDI193.bvec') +dest_dir = 'input_dir' +if not os.path.exists(source_dir): + # Get input data. + fetch_sherbrooke_3shell() +# Move inputs to working directory. +move_directory_files(source_dir, dest_dir, copy=True) +fdwi = os.path.join(dest_dir, 'HARDI193.nii.gz') +fbval = os.path.join(dest_dir, 'HARDI193.bval') +fbvec = os.path.join(dest_dir, 'HARDI193.bvec') # Load the dMRI datasets. img = nibabel.load(fdwi) data = img.get_data()