Mercurial > repos > greg > drmi

comparison dmri.py @ 26:65a365c8ca55 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author greg
date Wed, 29 Nov 2017 14:14:08 -0500
parents 88ff4adbfb2f
children 6e7ed2b633dc
comparison
equal deleted inserted replaced
25:264b9ed43fe3 26:65a365c8ca55
1 #!/usr/bin/env python 1 #!/usr/bin/env python
2 import argparse 2 import argparse
3 import os 3 import os
4 import nibabel
5 import shutil 4 import shutil
6 5
7 from dipy.core.gradients import gradient_table 6 from dipy.core.gradients import gradient_table
8 from dipy.data import fetch_sherbrooke_3shell, fetch_stanford_hardi 7 from dipy.data import fetch_sherbrooke_3shell, fetch_stanford_hardi
9 from dipy.io import read_bvals_bvecs 8 from dipy.io import read_bvals_bvecs
10 from matplotlib import pyplot 9 from matplotlib import pyplot
10
11 import nibabel
11 12
12 parser = argparse.ArgumentParser() 13 parser = argparse.ArgumentParser()
13 parser.add_argument('--drmi_dataset', dest='drmi_dataset', help='Input dataset') 14 parser.add_argument('--drmi_dataset', dest='drmi_dataset', help='Input dataset')
14 parser.add_argument('--output_nifti1', dest='output_nifti1', help='Output Nifti1 dataset') 15 parser.add_argument('--output_nifti1', dest='output_nifti1', help='Output Nifti1 dataset')
15 parser.add_argument('--output_png', dest='output_png', help='Output dataset') 16 parser.add_argument('--output_png', dest='output_png', help='Output dataset')