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comparison dmri.py @ 10:5014ba48e15e draft

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Uploaded
author greg
date Fri, 03 Nov 2017 13:46:21 -0400
parents cf847e9f1a3a
children 173c5c07b2f9
comparison
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9:cf847e9f1a3a 10:5014ba48e15e
10 parser.add_argument('--input', dest='input', help='Input dataset') 10 parser.add_argument('--input', dest='input', help='Input dataset')
11 parser.add_argument('--output', dest='output', help='Output dataset') 11 parser.add_argument('--output', dest='output', help='Output dataset')
12 12
13 args = parser.parse_args() 13 args = parser.parse_args()
14 14
15 input_dir = os.path.join('.dipy', 'sherbrooke_3shell') 15 input_dir = 'sherbrooke_3shell'
16 # Get input data. 16 # Get input data.
17 fetch_sherbrooke_3shell() 17 fetch_sherbrooke_3shell()
18 fdwi = os.path.join(input_dir, 'HARDI193.nii.gz') 18 fdwi = os.path.join(input_dir, 'HARDI193.nii.gz')
19 fbval = os.path.join(input_dir, 'HARDI193.bval') 19 fbval = os.path.join(input_dir, 'HARDI193.bval')
20 fbvec = os.path.join(input_dir, 'HARDI193.bvec') 20 fbvec = os.path.join(input_dir, 'HARDI193.bvec')