# HG changeset patch # User greg # Date 1479917077 18000 # Node ID 4e76decc720c49106d0fb4964b0cd2e0c33f2ed8 # Parent e7c4d4c7c1ddf56e3d112587a9b9e631765fc64f Uploaded diff -r e7c4d4c7c1dd -r 4e76decc720c data_manager/data_manager_plant_tribes_scaffolds_download.py --- a/data_manager/data_manager_plant_tribes_scaffolds_download.py Wed Nov 23 10:12:05 2016 -0500 +++ b/data_manager/data_manager_plant_tribes_scaffolds_download.py Wed Nov 23 11:04:37 2016 -0500 @@ -57,8 +57,9 @@ os.symlink(f, target_file) else: shutil.copyfile(f, target_file) + data_table_entry = dict(value=source_file, name=entry_name, path=f, description=description) for data_table_name in data_table_names: - data_manager_dict = add_data_table_entry(data_manager_dict, data_table_name, dict(value=source_file, name=entry_name, path=f, description=description)) + data_manager_dict = add_data_table_entry(data_manager_dict, data_table_name, data_table_entry) return data_manager_dict @@ -110,8 +111,9 @@ # Populate the data table, there should be a single entry in target_directory. for file_path in os.listdir(target_directory): entry_name = "%s" % os.path.basename(file_path) + data_table_entry = dict(value=entry_name, name=entry_name, path=file_path, description=description) for data_table_name in data_table_names: - data_manager_dict = add_data_table_entry(data_manager_dict, data_table_name, dict(value=entry_name, name=entry_name, path=file_path, description=description)) + data_manager_dict = add_data_table_entry(data_manager_dict, data_table_name, data_table_entry) return data_manager_dict @@ -141,10 +143,6 @@ # Initialize the data table. data_manager_dict = {} -data_manager_dict['value'] = args.name.lower() -data_manager_dict['name'] = args.name -data_manager_dict['path'] = '.' -data_manager_dict['description'] = description # Get the scaffolds data. if args.data_source == 'web_url':