Mercurial > repos > greg > create_streamlines

changeset 15:010f61a2276d draft default tip

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Uploaded
author greg
date Thu, 30 Nov 2017 10:22:42 -0500
parents 68a58b26d6df
children
files create_streamlines.py
diffstat 1 files changed, 1 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/create_streamlines.py	Thu Nov 30 10:16:18 2017 -0500
+++ b/create_streamlines.py	Thu Nov 30 10:22:42 2017 -0500
@@ -62,6 +62,7 @@
 cc_streamlines = utils.target(streamlines, cc_slice, affine=affine)
 cc_streamlines = list(cc_streamlines)
 
+M, grouping = utils.connectivity_matrix(cc_streamlines, labels, affine=affine, return_mapping=True, mapping_as_streamlines=True)
 lr_superiorfrontal_track = grouping[11, 54]
 shape = labels.shape
 dm = utils.density_map(lr_superiorfrontal_track, shape, affine=affine)