# HG changeset patch
# User greg
# Date 1512055362 18000
# Node ID 010f61a2276d7ed8a3ab46ecc1b2f5d35c1eebe1
# Parent  68a58b26d6df7a5daf15eaa681d6a7d9efdc7ffc
Uploaded

diff -r 68a58b26d6df -r 010f61a2276d create_streamlines.py
--- a/create_streamlines.py	Thu Nov 30 10:16:18 2017 -0500
+++ b/create_streamlines.py	Thu Nov 30 10:22:42 2017 -0500
@@ -62,6 +62,7 @@
 cc_streamlines = utils.target(streamlines, cc_slice, affine=affine)
 cc_streamlines = list(cc_streamlines)
 
+M, grouping = utils.connectivity_matrix(cc_streamlines, labels, affine=affine, return_mapping=True, mapping_as_streamlines=True)
 lr_superiorfrontal_track = grouping[11, 54]
 shape = labels.shape
 dm = utils.density_map(lr_superiorfrontal_track, shape, affine=affine)