# HG changeset patch
# User greg
# Date 1510339832 18000
# Node ID 3bc9d3e88e7b067f6c22dbda54b7f41e990fdeeb
# Parent  64b7d66acd756d201bbdfaedec887d7c235126c0
Uploaded

diff -r 64b7d66acd75 -r 3bc9d3e88e7b create_genome_tracks.R
--- a/create_genome_tracks.R	Fri Nov 10 13:48:01 2017 -0500
+++ b/create_genome_tracks.R	Fri Nov 10 13:50:32 2017 -0500
@@ -113,18 +113,12 @@
     return(cells);
 }
 
-# cell_info: shortid match with those in states,
-# long id, cell description, text color
-#run<-function(state_files, hub_id, opt$build, chrom_len_file, state_color, opt$target_url="http://bx.psu.edu/~yuzhang/tmp/", tracks_output_dir=NULL, hub_name=NULL, cell_info=NULL, header=NULL, statename=NULL)
-
 if(length(opt$hub_name) == 0) {
     hub_name = opt$hub_id;
 }
 
 # Create the tracks output directory.
-if(length(tracks_output_dir) == 0) {
-    tracks_output_dir = paste("tracks_", hub_id, "/", sep="");
-}
+tracks_output_dir = paste("tracks_", hub_id, "/", sep="");
 dir.create(tracks_output_dir, showWarnings=FALSE);
 
 # Create the color scheme.