Mercurial > repos > greg > cga_tools
annotate cgatools/tool-data/cg_crr_files.loc.sample @ 0:3b8b80827fbe draft default tip
Uploaded
| author | greg |
|---|---|
| date | Fri, 22 Jun 2012 14:25:22 -0400 |
| parents | |
| children |
| rev | line source |
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| 0 | 1 #This is a sample file distributed with cgatools repository that enables the cgatools |
| 2 #functions to use the .crr reference files. After installation download the reference | |
| 3 #genome files form Complete Genomics' ftp site: | |
| 4 #ftp://ftp.completegenomics.com/ReferenceFiles/build37.crr | |
| 5 #ftp://ftp.completegenomics.com/ReferenceFiles/build36.crr | |
| 6 #and edit the path for the reference genomes to correspond to their location. | |
| 7 # | |
| 8 #Restart your Galaxy instance to ensure the file locations are registered with Galaxy | |
| 9 #properly. | |
| 10 # | |
| 11 #The cg_crr_files.loc file has this format (white space characters are TAB characters): | |
| 12 # | |
| 13 #<value> <dbkey> <name> <path> | |
| 14 # | |
| 15 #hg19 hg19 build 37 /absolute/path/to/build37.crr | |
| 16 #hg18 hg18 build 36 /absolute/path/to/build36.crr | |
| 17 |