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comparison bmsb.xml @ 20:b477344d20f1 draft

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Uploaded
author greg
date Tue, 16 Aug 2016 13:05:16 -0400
parents f6977dcfbec3
children c0ab95d49981
comparison
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19:d965e188feab 20:b477344d20f1
6 <requirement type="package" version="1.3.0">r-optparse</requirement> 6 <requirement type="package" version="1.3.0">r-optparse</requirement>
7 </requirements> 7 </requirements>
8 <command> 8 <command>
9 <![CDATA[ 9 <![CDATA[
10 Rscript $__tool_directory__/bmsb.R 10 Rscript $__tool_directory__/bmsb.R
11 #if str($output_r_logging_cond.output_r_logging) == "yes":
12 -s "true"
13 -m "$output_r_log"
14 #end if
11 -o "$output" 15 -o "$output"
12 ]]> 16 ]]>
13 </command> 17 </command>
14 <inputs> 18 <inputs>
15 <param name="input" type="data" format="csv" label="Select temperature data" /> 19 <param name="input" type="data" format="csv" label="Select temperature data" />
20 <conditional name="output_r_logging_cond">
21 <param name="output_r_logging" type="select" label="Output R logging?" help="Generate an additional dataset consisting of R messages.">
22 <option value="yes" selected="True">Yes</option>
23 <option value="no">No</option>
24 </param>
25 <when value="no"/>
26 <when value="yes"/>
27 </conditional>
16 </inputs> 28 </inputs>
17 <outputs> 29 <outputs>
30 <data name="output_r_log" format="txt" label="${tool.name} on ${on_string}: R log">
31 <filter>output_r_logging_cond['output_r_logging'] == "yes"</filter>
32 </data>
18 <data name="output" format="RData"/> 33 <data name="output" format="RData"/>
19 </outputs> 34 </outputs>
20 <help> 35 <help>
21 **What it does** 36 **What it does**
22 37