Mercurial > repos > greg > assembly_post_processor

diff test-data/transcripts.cleaned.cds @ 7:4d82da0ca014 draft

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author greg
date Mon, 30 Jan 2017 11:03:42 -0500
parents cecea7fdccf8
children cc4dba9f6ecd
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--- a/test-data/transcripts.cleaned.cds	Mon Jan 30 09:23:36 2017 -0500
+++ b/test-data/transcripts.cleaned.cds	Mon Jan 30 11:03:42 2017 -0500
@@ -1,14 +1,24 @@
->contig_2
-CTTTCCAAGGTACCCATCCCATCCAACAACATATATGCTATAAATGATAAGAAGTCCCCGGAAGATGCAGCAGACGACTA
-CGAAAACCGCCTCAAGGAACTCGTCTCCGAAAAAATCATACCCGTTTCAACCATTAGCGGGTTCCCGAAGTTCGACCTCA
-TGTTGCTTGGAATGGGGCCCGACGGCCATGTGGCCTCTCTTTTCCCTTCTCACATGCAACGCTATGAGAAGGAGAAATGG
-GTCACTTTCATAACTGACTCTCCCAAACCGCCTCCGTCGAGAATCACTTTTACGTTTCCGATGATCAACTCGGCTTCGGA
-GATCGCTATGGTGGTTACCGGGGCTGATTTGGCTGGTACAACTAAGATAGCATTGGGTACTACGGGCAATGTTAAGCCGG
-GTGAGACTCCTTTGCCTTGTACTGAAGTTTCGGCTGAGGGAGAGGTTACTTGGTTCTTGGACAAAGATGCTGCTTCACAA
-CTGTTAAATTATGTGCGCTTTGATGAT
->contig_9
-CTTCGGTTAAAGGCAGATGAGGAGGCACAATGTTTGAATCAGATGCAGCGTATCATTTTTGATGAAATTATGGAGCATGT
-GGAGTTAGAAAAGGGGGGCTTCTATTTCGTATATCGCCCTGGGGGCAACGGAAAGACCTTGTGGTTGGCTATTATCTCAA
-AACTGAGAAGCGAGGGTAGAATAGTTCTCGCAGTGGCTTCATCAGGTATAGCATTGCTTTTGGTTGAGGGTGGTAGAACA
-GCCCATTCTCGATTTAAAATACCCATAGATGTCAATGAATATAACAATTGTGAAATTAAACAGAACATCTACCTCGCTGA
-ACTTATATGTCACACCAATTTGGTCATTTGGGATGAGGCACCTATGACTCAATATTTTGTCTTTGAGGCGGTT
+>contig_1
+AAAAAATTATATGGAGACAAGGAAGATATCCTTGTCCCAGATATTTTCTGGGATTACACGAGTGGAAAGGTGCTAACAAT
+GGAGTGGGTTGAAGGTGTTAAATTAAATGAGCAAGATGCCGTTGAGAGTCAAGGGCTCAGTGTTCTGGATCTGGTGAATA
+CCGGCATACAGTGCAGTCTTCGACAGCTGCTTGAGTACGGCTATTTTCATGCAGATCCTCACCCAGGGAATCTCTTAGCT
+ACACCTGACGGGAAGCTTGCTTTTCTTGATTTTGGAATGATGAGTGAGACTCCTGAACAAGCAAGATCGGCCATAATTGG
+TCATGTTGTACACATGGTTAAT
+>contig_100
+TGCAAGCTTCAGGAAATATCCTCAACTCTCATAACAATCCTTGTCATTCTCTCCCCAGACAAACTCATATTCTTCGCATC
+AACAAACCGCGATTCCTTGAACAATGTCACGATCTCCTCCACCTCATCTACCCCACACTCTTCCACAGTCACAACACAAA
+CCCCACCACTCCTCACCGTCCTTTCAATCTGTCCTGCGTACCGCCTGGGGAACAGAGCCCGATCTAAGTACAGCCCGAGC
+CCGAGATCAAACATTCCATCAAAAAATGGCAAGTTATGGGGATCCGCCCGGCTCACCAGTGGAGGCGCTTCAACCAGTTC
+CACCCCCGTGACGTCCTCCACGCCCAGTTCCTGCAGCGCTTGGACGGCATGGCCTGGCCCGGCGGACGAAACTAGGACCC
+GAGAGTCGTTCGTAATGCAGTTTTGGGCC
+>contig_107
+TTTGGCCTTTACCTTGAACGAATTTCTGCTCGCCAAAGTCGTCTCTTTGTCGATCGCAGATCGCGGGTTGCAGCTCCAGC
+GCAGGCCGAAGTTCGGGGACGACGGAAGCTTCGATTTCCTACTGCACCAGGTCGCAGTCGGGCCCAGTCGCAGATCGCCC
+TGCATCGCCGCCACATGACCGATCTGGAAACCACTGCATGTTTGACTTATGATTTTGGTGCTCGATTTGCGGGTGTTTGT
+GCGAGCGTGAGTTATATGTTAAGAAAATCTTGTAGAAGTGGATCGAGAATTAGAGAGAGGGAGGGGCAAGAAGATGCAGA
+G
+>contig_11
+ATTTATGGAAAGGGGATTCAAAATATGAGAACACTCTGGGGTGGCGTTGCTCCCGAATCTCCCGTCGTTGTTGTTGGAGG
+CGGTGTTACTCCAGAATCTCCCGTCGTCGGAGGCATTGTTCTAGGATCTCCCGCAGTGCTGCTTAAGTCGGATTTACTCC
+AAGCTCTCCCACCGCGGCTCCTGAAGTCGGCGTTGTTCCAAAATCTCCCGTCGCCACTGTTGAAGTCGGGGTTGCTCCAT
+GATATCCCGTCGGAGTTGCTCCGAATCTCCCGTTGTTGCTGCTGCAGTCGGTGTTGCTCC