Mercurial > repos > greg > assembly_post_processor

comparison assembly_post_processor.xml @ 76:ce5b201b7782 draft

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Uploaded
author greg
date Thu, 05 Oct 2017 14:03:35 -0400
parents 9da5dc4b99cc
children cfb4b150fb3c
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75:37ed984d934e 76:ce5b201b7782
88 <param name="min_length" type="integer" value="200" label="Minimum sequence length"/> 88 <param name="min_length" type="integer" value="200" label="Minimum sequence length"/>
89 </when> 89 </when>
90 </conditional> 90 </conditional>
91 </inputs> 91 </inputs>
92 <outputs> 92 <outputs>
93 <collection name="output_tgf" type="list" label="Targeted gene families statistics: ${tool.name} on ${on_string}"> 93 <collection name="output_stats" type="list" label="Targeted gene families statistics: ${tool.name} on ${on_string}">
94 <discover_datasets pattern="__name__" directory="assemblyPostProcessing_dir/targeted_gene_families_statistics" format="tabular" /> 94 <discover_datasets pattern="__name__" directory="assemblyPostProcessing_dir/targeted_gene_families_statistics" format="tabular" />
95 <filter>options_type['options_type_selector'] == 'advanced' and options_type['target_gene_family_assembly_cond']['target_gene_family_assembly'] == 'yes'</filter> 95 <filter>options_type['options_type_selector'] == 'advanced' and options_type['target_gene_family_assembly_cond']['target_gene_family_assembly'] == 'yes'</filter>
96 </collection> 96 </collection>
97 <collection name="output_tgf" type="list" label="Targeted gene families: ${tool.name} on ${on_string}"> 97 <collection name="output_tgf" type="list" label="Targeted gene families: ${tool.name} on ${on_string}">
98 <discover_datasets pattern="__name__" directory="assemblyPostProcessing_dir/targeted_gene_families" format="fasta" /> 98 <discover_datasets pattern="__name__" directory="assemblyPostProcessing_dir/targeted_gene_families" format="fasta" />