Mercurial > repos > greg > assembly_post_processor

comparison assembly_post_processor.xml @ 93:c58892e1a388 draft

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Uploaded
author greg
date Thu, 26 Oct 2017 11:05:42 -0400
parents 55024e4d84d4
children 33915a72ae4e
comparison
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92:55024e4d84d4 93:c58892e1a388
24 #if str($target_gene_family_assembly_cond.min_coverage) != '0.0': 24 #if str($target_gene_family_assembly_cond.min_coverage) != '0.0':
25 --min_coverage $target_gene_family_assembly_cond.min_coverage 25 --min_coverage $target_gene_family_assembly_cond.min_coverage
26 #end if 26 #end if
27 #end if 27 #end if
28 #if str($options_type.strand_specific) == 'yes': 28 #if str($options_type.strand_specific) == 'yes':
29 --strand_specific true 29 --strand_specific
30 #end if 30 #end if
31 #if str($options_type.dereplicate) == 'yes': 31 #if str($options_type.dereplicate) == 'yes':
32 --dereplicate true 32 --dereplicate
33 #end if 33 #end if
34 --min_length $options_type.min_length 34 --min_length $options_type.min_length
35 #end if 35 #end if
36 --num_threads \${GALAXY_SLOTS:-4} 36 --num_threads \${GALAXY_SLOTS:-4}
37 &>proc.log 37 &>proc.log