Mercurial > repos > galaxyp > unipept
diff unipept.xml @ 1:b65ee881ca64 draft
planemo upload for repository http://unipept.ugent.be/apidocs commit e91b0fe16bf468b34884508652359b91847d1f95
author | galaxyp |
---|---|
date | Tue, 22 Jan 2019 20:58:28 -0500 |
parents | b33376bf2290 |
children | dca8a1fe0bf3 |
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--- a/unipept.xml Wed Oct 24 14:45:18 2018 -0400 +++ b/unipept.xml Tue Jan 22 20:58:28 2019 -0500 @@ -228,7 +228,6 @@ </conditional> --> </actions> -peptide,total_protein_count,ec_numbers,ec_protein_counts,ec_names,go_terms,go_protein_counts,go_names </data> <data name="output_csv" format="csv" label="${tool.name} ${unipept.api} on ${on_string} csv"> <filter>'csv' in selected_outputs</filter> @@ -288,7 +287,7 @@ <output name="output_tsv"> <assert_contents> <has_text text="9606" /> - <has_text text="9598" /> + <has_text text="9596" /> </assert_contents> </output> </test> @@ -303,33 +302,33 @@ <output name="output_tsv"> <assert_contents> <has_text text="sapiens" /> - <has_text text="troglodytes" /> + <has_text text="paniscus" /> <has_text text="Gorilla" /> - <has_text text="Macaca" /> </assert_contents> </output> </test> <test> - <param name="api" value="pept2lca"/> + <param name="api" value="pept2funct"/> <param name="fmt" value="tabular"/> - <param name="input_tsv" value="tryptic.tsv"/> + <param name="input_tsv" value="input.tsv"/> <param name="column" value="2"/> <param name="extra" value="True"/> <param name="names" value="True"/> <param name="selected_outputs" value="tsv,ec_tsv,go_tsv,unmatched"/> <output name="output_tsv"> <assert_contents> - <has_text text="3.2.1.17" /> + <has_text text="GO:0004802" /> + <has_text text="2.2.1.1" /> </assert_contents> </output> <output name="output_ec_tsv"> <assert_contents> - <has_text text="3.2.1.17" /> + <has_text text="2.2.1.1" /> </assert_contents> </output> <output name="output_go_tsv"> <assert_contents> - <has_text text="GO:0006412" /> + <has_text text="GO:0004802" /> </assert_contents> </output> </test>