Mercurial > repos > galaxyp > openms_xmlvalidator
comparison XMLValidator.xml @ 9:2af382578eb2 draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author | galaxyp |
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date | Wed, 15 May 2019 06:41:30 -0400 |
parents | 5bc179c8c49c |
children | 826fe1247aad |
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8:59551a8698b7 | 9:2af382578eb2 |
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1 <?xml version='1.0' encoding='UTF-8'?> | 1 <?xml version='1.0' encoding='UTF-8'?> |
2 <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.--> | 2 <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTDConverter.--> |
3 <!--Proposed Tool Section: [Utilities]--> | 3 <!--Proposed Tool Section: [Utilities]--> |
4 <tool id="XMLValidator" name="XMLValidator" version="2.2.0.1"> | 4 <tool id="XMLValidator" name="XMLValidator" version="2.3.0"> |
5 <description>Validates XML files against an XSD schema.</description> | 5 <description>Validates XML files against an XSD schema.</description> |
6 <macros> | 6 <macros> |
7 <token name="@EXECUTABLE@">XMLValidator</token> | 7 <token name="@EXECUTABLE@">XMLValidator</token> |
8 <import>macros.xml</import> | 8 <import>macros.xml</import> |
9 </macros> | 9 </macros> |
10 <expand macro="references"/> | 10 <expand macro="references"/> |
11 <expand macro="stdio"/> | 11 <expand macro="stdio"/> |
12 <expand macro="requirements"/> | 12 <expand macro="requirements"/> |
13 <command>XMLValidator | 13 <command detect_errors="aggressive"><![CDATA[XMLValidator |
14 | 14 |
15 #if $param_in: | 15 #if $param_in: |
16 -in $param_in | 16 -in $param_in |
17 #end if | 17 #end if |
18 #if $param_schema: | 18 #if $param_schema: |
22 #if $adv_opts.param_force: | 22 #if $adv_opts.param_force: |
23 -force | 23 -force |
24 #end if | 24 #end if |
25 #end if | 25 #end if |
26 > $param_stdout | 26 > $param_stdout |
27 </command> | 27 ]]></command> |
28 <inputs> | 28 <inputs> |
29 <param name="param_in" type="data" format="mzml,mzData,featurexml,mzid,idxml,consensusxml,mzxml,txt,pepxml,traml,xml" optional="False" label="file to validate" help="(-in) "/> | 29 <param name="param_in" type="data" format="mzml,mzData,featurexml,mzid,idxml,consensusxml,mzxml,txt,pepxml,traml,xml" optional="False" label="file to validate" help="(-in) "/> |
30 <param name="param_schema" type="data" format="txt" optional="True" label="schema to validate against" help="(-schema) <br>If no schema is given, the file is validated against the latest schema of the file type"/> | 30 <param name="param_schema" type="data" format="txt" optional="True" label="schema to validate against" help="(-schema) <br>If no schema is given, the file is validated against the latest schema of the file type"/> |
31 <expand macro="advanced_options"> | 31 <expand macro="advanced_options"> |
32 <param name="param_force" display="radio" type="boolean" truevalue="-force" falsevalue="" checked="false" optional="True" label="Overwrite tool specific checks" help="(-force) "/> | 32 <param name="param_force" display="radio" type="boolean" truevalue="-force" falsevalue="" checked="false" optional="True" label="Overwrite tool specific checks" help="(-force) "/> |
36 <data name="param_stdout" format="txt" label="Output from stdout"/> | 36 <data name="param_stdout" format="txt" label="Output from stdout"/> |
37 </outputs> | 37 </outputs> |
38 <help>Validates XML files against an XSD schema. | 38 <help>Validates XML files against an XSD schema. |
39 | 39 |
40 | 40 |
41 For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_XMLValidator.html</help> | 41 For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/UTILS_XMLValidator.html</help> |
42 </tool> | 42 </tool> |