Mercurial > repos > galaxyp > openms_spectrastsearchadapter
diff SpectraSTSearchAdapter.xml @ 7:4727152990a3 draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author | galaxyp |
---|---|
date | Wed, 15 May 2019 06:44:21 -0400 |
parents | caf306f53854 |
children | b0f0e7e233e5 |
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--- a/SpectraSTSearchAdapter.xml Mon Feb 12 08:55:32 2018 -0500 +++ b/SpectraSTSearchAdapter.xml Wed May 15 06:44:21 2019 -0400 @@ -1,7 +1,7 @@ <?xml version='1.0' encoding='UTF-8'?> -<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.--> +<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTDConverter.--> <!--Proposed Tool Section: [Utilities]--> -<tool id="SpectraSTSearchAdapter" name="SpectraSTSearchAdapter" version="2.2.0.1"> +<tool id="SpectraSTSearchAdapter" name="SpectraSTSearchAdapter" version="2.3.0"> <description>Interface to the SEARCH Mode of the SpectraST executable</description> <macros> <token name="@EXECUTABLE@">SpectraSTSearchAdapter</token> @@ -10,7 +10,7 @@ <expand macro="references"/> <expand macro="stdio"/> <expand macro="requirements"/> - <command>SpectraSTSearchAdapter + <command detect_errors="aggressive"><![CDATA[SpectraSTSearchAdapter -spectra_files #for token in $param_spectra_files: @@ -64,7 +64,7 @@ -force #end if #end if -</command> +]]></command> <inputs> <param name="param_spectra_files" type="data" format="mzml,mzxml,mzData,dta,msp" multiple="true" optional="False" size="30" label="File names(s) of spectra to be searched" help="(-spectra_files) "> <sanitizer> @@ -96,5 +96,5 @@ <help>Interface to the SEARCH Mode of the SpectraST executable -For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_SpectraSTSearchAdapter.html</help> +For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/UTILS_SpectraSTSearchAdapter.html</help> </tool>