Mercurial > repos > galaxyp > openms_qcembedder

comparison macros.xml @ 12:b0c59adb67ef draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author galaxyp
date Wed, 15 May 2019 05:19:56 -0400
parents 0eeb62f3f05e
children 7f5b37bcb7bb
comparison
equal deleted inserted replaced
11:84b3a1b2b535 12:b0c59adb67ef
1 <?xml version='1.0' encoding='UTF-8'?> 1 <?xml version='1.0' encoding='UTF-8'?>
2 <macros> 2 <macros>
3 <xml name="requirements"> 3 <xml name="requirements">
4 <requirements> 4 <requirements>
5 <requirement type="package" version="2.2">openms</requirement> 5 <requirement type="package" version="2.3">openms</requirement>
6 <requirement type="package" version="15.12.15.2">xtandem</requirement> 6 <requirement type="package" version="15.12.15.2">xtandem</requirement>
7 <requirement type="package" version="1.0">fido</requirement> 7 <requirement type="package" version="1.0">fido</requirement>
8 <requirement type="package" version="2016.10.26">msgf_plus</requirement> 8 <requirement type="package" version="2017.07.21">msgf_plus</requirement>
9 <yield/> 9 <yield/>
10 </requirements> 10 </requirements>
11 </xml> 11 </xml>
12 <xml name="stdio"> 12 <xml name="stdio">
13 <stdio> 13 <stdio>
14 <exit_code range="1:"/> 14 <regex match="Could not allocate metaspace" level="fatal_oom" description="Java memory Exception"/>
15 <exit_code range=":-1"/> 15 <regex match="Cannot create VM thread" level="fatal_oom" description="Java memory Exception"/>
16 <regex match="Exception:"/> 16 <regex match="qUncompress: could not allocate enough memory to uncompress data" level="fatal_oom" description="Java memory Exception"/>
17 </stdio> 17 </stdio>
18 </xml> 18 </xml>
19 <xml name="references"> 19 <xml name="references">
20 <citations> 20 <citations>
21 <citation type="doi">doi:10.1186/1471-2105-9-163</citation> 21 <citation type="doi">doi:10.1186/1471-2105-9-163</citation>