Mercurial > repos > galaxyp > openms_qcembedder

comparison QCEmbedder.xml @ 12:b0c59adb67ef draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author galaxyp
date Wed, 15 May 2019 05:19:56 -0400
parents babb1318f498
children 7f5b37bcb7bb
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11:84b3a1b2b535 12:b0c59adb67ef
1 <?xml version='1.0' encoding='UTF-8'?> 1 <?xml version='1.0' encoding='UTF-8'?>
2 <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.--> 2 <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTDConverter.-->
3 <!--Proposed Tool Section: [Utilities]--> 3 <!--Proposed Tool Section: [Utilities]-->
4 <tool id="QCEmbedder" name="QCEmbedder" version="2.2.0"> 4 <tool id="QCEmbedder" name="QCEmbedder" version="2.3.0">
5 <description>Attaches a table or an image to a given qc parameter.</description> 5 <description>Attaches a table or an image to a given qc parameter.</description>
6 <macros> 6 <macros>
7 <token name="@EXECUTABLE@">QCEmbedder</token> 7 <token name="@EXECUTABLE@">QCEmbedder</token>
8 <import>macros.xml</import> 8 <import>macros.xml</import>
9 </macros> 9 </macros>
10 <expand macro="references"/> 10 <expand macro="references"/>
11 <expand macro="stdio"/> 11 <expand macro="stdio"/>
12 <expand macro="requirements"/> 12 <expand macro="requirements"/>
13 <command>QCEmbedder 13 <command detect_errors="aggressive"><![CDATA[QCEmbedder
14 14
15 #if $param_in: 15 #if $param_in:
16 -in $param_in 16 -in $param_in
17 #end if 17 #end if
18 #if $param_qp_att_acc: 18 #if $param_qp_att_acc:
39 #if $adv_opts.adv_opts_selector=='advanced': 39 #if $adv_opts.adv_opts_selector=='advanced':
40 #if $adv_opts.param_force: 40 #if $adv_opts.param_force:
41 -force 41 -force
42 #end if 42 #end if
43 #end if 43 #end if
44 </command> 44 ]]></command>
45 <inputs> 45 <inputs>
46 <param name="param_in" type="data" format="qcml" optional="True" label="Input qcml file" help="(-in) "/> 46 <param name="param_in" type="data" format="qcml" optional="True" label="Input qcml file" help="(-in) "/>
47 <param name="param_qp_att_acc" type="text" size="30" label="Defines the qp cv accession of the qp to which the table/image is attached" help="(-qp_att_acc) "> 47 <param name="param_qp_att_acc" type="text" size="30" label="Defines the qp cv accession of the qp to which the table/image is attached" help="(-qp_att_acc) ">
48 <sanitizer> 48 <sanitizer>
49 <valid initial="string.printable"> 49 <valid initial="string.printable">
79 <data name="param_out" format="qcml"/> 79 <data name="param_out" format="qcml"/>
80 </outputs> 80 </outputs>
81 <help>Attaches a table or an image to a given qc parameter. 81 <help>Attaches a table or an image to a given qc parameter.
82 82
83 83
84 For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_QCEmbedder.html</help> 84 For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/UTILS_QCEmbedder.html</help>
85 </tool> 85 </tool>