Mercurial > repos > galaxyp > openms_peakpickerwavelet
diff PeakPickerWavelet.xml @ 12:81ab5441f18c draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author | galaxyp |
---|---|
date | Wed, 15 May 2019 05:54:59 -0400 |
parents | b05ee1050b5e |
children | 22f988ca1de4 |
line wrap: on
line diff
--- a/PeakPickerWavelet.xml Mon Feb 12 08:49:55 2018 -0500 +++ b/PeakPickerWavelet.xml Wed May 15 05:54:59 2019 -0400 @@ -1,7 +1,7 @@ <?xml version='1.0' encoding='UTF-8'?> -<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.--> +<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTDConverter.--> <!--Proposed Tool Section: [Signal processing and preprocessing]--> -<tool id="PeakPickerWavelet" name="PeakPickerWavelet" version="2.2.0"> +<tool id="PeakPickerWavelet" name="PeakPickerWavelet" version="2.3.0"> <description>Finds mass spectrometric peaks in profile mass spectra.</description> <macros> <token name="@EXECUTABLE@">PeakPickerWavelet</token> @@ -10,7 +10,7 @@ <expand macro="references"/> <expand macro="stdio"/> <expand macro="requirements"/> - <command>PeakPickerWavelet + <command detect_errors="aggressive"><![CDATA[PeakPickerWavelet #if $param_in: -in $param_in @@ -149,7 +149,7 @@ -algorithm:SignalToNoiseEstimationParameter:noise_for_empty_window $adv_opts.param_algorithm_SignalToNoiseEstimationParameter_noise_for_empty_window #end if #end if -</command> +]]></command> <inputs> <param name="param_in" type="data" format="mzml" optional="False" label="input profile data file" help="(-in) "/> <param name="param_algorithm_signal_to_noise" type="float" min="0.0" optional="True" value="1.0" label="Minimal signal to noise ratio for a peak to be picked" help="(-signal_to_noise) "/> @@ -204,5 +204,5 @@ <help>Finds mass spectrometric peaks in profile mass spectra. -For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/TOPP_PeakPickerWavelet.html</help> +For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/TOPP_PeakPickerWavelet.html</help> </tool>