diff OpenSwathFileSplitter.xml @ 13:c2ff1c644604 draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author galaxyp
date Wed, 15 May 2019 05:43:40 -0400
parents 4a69c76c5289
children b45a21325d16
line wrap: on
line diff
--- a/OpenSwathFileSplitter.xml	Mon Feb 12 08:46:08 2018 -0500
+++ b/OpenSwathFileSplitter.xml	Wed May 15 05:43:40 2019 -0400
@@ -1,7 +1,7 @@
 <?xml version='1.0' encoding='UTF-8'?>
-<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.-->
+<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTDConverter.-->
 <!--Proposed Tool Section: [Targeted Experiments]-->
-<tool id="OpenSwathFileSplitter" name="OpenSwathFileSplitter" version="2.2.0.1">
+<tool id="OpenSwathFileSplitter" name="OpenSwathFileSplitter" version="2.3.0">
   <description>Splits SWATH files into n files, each containing one window.</description>
   <macros>
     <token name="@EXECUTABLE@">OpenSwathFileSplitter</token>
@@ -10,7 +10,7 @@
   <expand macro="references"/>
   <expand macro="stdio"/>
   <expand macro="requirements"/>
-  <command>OpenSwathFileSplitter
+  <command detect_errors="aggressive"><![CDATA[OpenSwathFileSplitter
 
 -in
   #for token in $param_in:
@@ -25,7 +25,7 @@
 #end if
 #end if
 &gt; $param_stdout
-</command>
+]]></command>
   <inputs>
     <param name="param_in" type="data" format="mzml,mzxml" multiple="true" optional="False" size="30" label="Input file (SWATH/DIA file)" help="(-in) ">
       <sanitizer>
@@ -53,5 +53,5 @@
   <help>Splits SWATH files into n files, each containing one window.
 
 
-For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_OpenSwathFileSplitter.html</help>
+For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/UTILS_OpenSwathFileSplitter.html</help>
 </tool>