Mercurial > repos > galaxyp > openms_luciphoradapter
diff LuciphorAdapter.xml @ 1:55817a7034be draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 820d990f9217706e693b8a2f1da91e13c09cb0fb
| author | galaxyp |
|---|---|
| date | Tue, 18 Apr 2017 15:39:59 -0400 |
| parents | ea658d0af701 |
| children | 561679970134 |
line wrap: on
line diff
--- a/LuciphorAdapter.xml Wed Mar 01 10:10:37 2017 -0500 +++ b/LuciphorAdapter.xml Tue Apr 18 15:39:59 2017 -0400 @@ -22,13 +22,23 @@ -out $param_out #end if #if $param_fragment_method: - -fragment_method $param_fragment_method + -fragment_method + #if " " in str($param_fragment_method): + "$param_fragment_method" + #else + $param_fragment_method + #end if #end if #if $param_fragment_mass_tolerance: -fragment_mass_tolerance $param_fragment_mass_tolerance #end if #if $param_fragment_error_units: - -fragment_error_units $param_fragment_error_units + -fragment_error_units + #if " " in str($param_fragment_error_units): + "$param_fragment_error_units" + #else + $param_fragment_error_units + #end if #end if #if $param_min_mz: -min_mz $param_min_mz @@ -91,7 +101,12 @@ -num_threads $param_num_threads #end if #if $param_run_mode: - -run_mode $param_run_mode + -run_mode + #if " " in str($param_run_mode): + "$param_run_mode" + #else + $param_run_mode + #end if #end if #if $adv_opts.adv_opts_selector=='advanced': #if $adv_opts.param_force: