Mercurial > repos > galaxyp > openms_idposteriorerrorprobability

view test-data/examples/simulation/README @ 18:6daaa75ccb99 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 6e7368b7f178fbd1f08c28eea1b538add6943a65-dirty"
author galaxyp
date Sun, 13 Dec 2020 15:03:50 +0000
parents
children
line wrap: on
line source

Default retention time model used during map simulation (via MSSimulator).
Feel free to train your own model, depending on your column conditions.

This model is trained from the supplementary material from the article:
Improved Peptide Elution Time Prediction for Reversed-Phase Liquid Chromatography-MS by Incorporating Peptide Sequence Information
Konstantinos Petritis,, Lars J. Kangas,, Bo Yan,, Matthew E. Monroe,, Eric F. Strittmatter,, Wei-Jun Qian,, Joshua N. Adkins,, Ronald J. Moore,, Ying Xu,, Mary S. Lipton,, David G. Camp, II, and, Richard D. Smith,
Analytical Chemistry 2006 78 (14), 5026-5039
http://pubs.acs.org/doi/suppl/10.1021/ac060143p