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view test-data/examples/BSA/BSA1_OMSSA.idXML @ 18:6daaa75ccb99 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 6e7368b7f178fbd1f08c28eea1b538add6943a65-dirty"
author galaxyp
date Sun, 13 Dec 2020 15:03:50 +0000
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<?xml version="1.0" encoding="UTF-8"?>
<?xml-stylesheet type="text/xsl" href="../../XSL/IdXML.xsl"?>
<IdXML version="1.3" xsi:noNamespaceSchemaLocation="http://open-ms.sourceforge.net/schemas/IdXML_1_3.xsd" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
	<SearchParameters id="SP_0" db="18Protein_SoCe_Tr_detergents_trace_target_decoy.fasta" db_version="" taxonomy="0" mass_type="monoisotopic" charges="+1-+3" enzyme="trypsin" missed_cleavages="1" precursor_peak_tolerance="0.05" peak_mass_tolerance="0.3" >
		<VariableModification name="Carbamidomethyl (C)" />
		<VariableModification name="Oxidation (M)" />
	</SearchParameters>
	<IdentificationRun date="2009-11-17T11:11:11" search_engine="OMSSA" search_engine_version="2.1.4" search_parameters_ref="SP_0" >
		<ProteinIdentification score_type="FDR" higher_score_better="false" significance_threshold="0" >
			<ProteinHit id="PH_0" accession="tr|A9FUD7|A9FUD7_SORC5" score="0" sequence="" >
				<UserParam type="float" name="OMSSA_score" value="0"/>
			</ProteinHit>
			<ProteinHit id="PH_1" accession="tr|A9G0B6|A9G0B6_SORC5" score="0" sequence="" >
				<UserParam type="float" name="OMSSA_score" value="0"/>
			</ProteinHit>
			<ProteinHit id="PH_2" accession="tr|A9G8G1|A9G8G1_SORC5" score="0" sequence="" >
				<UserParam type="float" name="OMSSA_score" value="0"/>
			</ProteinHit>
			<ProteinHit id="PH_3" accession="tr|A9GID7|A9GID7_SORC5" score="0" sequence="" >
				<UserParam type="float" name="OMSSA_score" value="0"/>
			</ProteinHit>
			<ProteinHit id="PH_4" accession="tr|A9GN44|A9GN44_SORC5" score="0" sequence="" >
				<UserParam type="float" name="OMSSA_score" value="0"/>
			</ProteinHit>
			<ProteinHit id="PH_5" accession="tr|A9GV08|A9GV08_SORC5" score="0" sequence="" >
				<UserParam type="float" name="OMSSA_score" value="0"/>
			</ProteinHit>
			<ProteinHit id="PH_6" accession="Q15323|K1H1_HUMAN" score="0" sequence="" >
				<UserParam type="float" name="OMSSA_score" value="0"/>
			</ProteinHit>
			<ProteinHit id="PH_7" accession="Q14532|K1H2_HUMAN" score="0" sequence="" >
				<UserParam type="float" name="OMSSA_score" value="0"/>
			</ProteinHit>
			<ProteinHit id="PH_8" accession="Q92764|KRT35_HUMAN" score="0" sequence="" >
				<UserParam type="float" name="OMSSA_score" value="0"/>
			</ProteinHit>
			<ProteinHit id="PH_9" accession="O76013|KRT36_HUMAN" score="0" sequence="" >
				<UserParam type="float" name="OMSSA_score" value="0"/>
			</ProteinHit>
			<ProteinHit id="PH_10" accession="O76014|KRT37_HUMAN" score="0" sequence="" >
				<UserParam type="float" name="OMSSA_score" value="0"/>
			</ProteinHit>
			<ProteinHit id="PH_11" accession="O76015|KRT38_HUMAN" score="0" sequence="" >
				<UserParam type="float" name="OMSSA_score" value="0"/>
			</ProteinHit>
			<ProteinHit id="PH_12" accession="Q14525|KT33B_HUMAN" score="0" sequence="" >
				<UserParam type="float" name="OMSSA_score" value="0"/>
			</ProteinHit>
			<ProteinHit id="PH_13" accession="P00761|TRYP_PIG" score="0" sequence="" >
				<UserParam type="float" name="OMSSA_score" value="0"/>
			</ProteinHit>
			<ProteinHit id="PH_14" accession="P02769|ALBU_BOVIN" score="0" sequence="" >
				<UserParam type="float" name="OMSSA_score" value="0"/>
			</ProteinHit>
		</ProteinIdentification>
		<PeptideIdentification score_type="q-value" higher_score_better="false" significance_threshold="0" MZ="358.174682617188" RT="1554.4921875" >
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				<UserParam type="float" name="OMSSA_score" value="0.000624514018064888"/>
				<UserParam type="string" name="target_decoy" value="target"/>
			</PeptideHit>
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		<PeptideIdentification score_type="q-value" higher_score_better="false" significance_threshold="0" MZ="368.832153320312" RT="1607.2958984375" >
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				<UserParam type="string" name="target_decoy" value="target"/>
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				<UserParam type="float" name="OMSSA_score" value="0.140841796155119"/>
				<UserParam type="string" name="target_decoy" value="target"/>
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		<PeptideIdentification score_type="q-value" higher_score_better="false" significance_threshold="0" MZ="368.832061767578" RT="1697.94360351562" >
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			</PeptideHit>
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		<PeptideIdentification score_type="q-value" higher_score_better="false" significance_threshold="0" MZ="722.325378417969" RT="1736.66821289062" >
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