Mercurial > repos > galaxyp > openms_idmapper

diff IDMapper.xml @ 1:c8f983753c26 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 820d990f9217706e693b8a2f1da91e13c09cb0fb
author galaxyp
date Tue, 18 Apr 2017 15:36:25 -0400
parents 6b9d357bb8d7
children bef5424453e4
line wrap: on
line diff
--- a/IDMapper.xml	Wed Mar 01 10:04:21 2017 -0500
+++ b/IDMapper.xml	Tue Apr 18 15:36:25 2017 -0400
@@ -28,10 +28,20 @@
   -mz_tolerance $param_mz_tolerance
 #end if
 #if $param_mz_measure:
-  -mz_measure $param_mz_measure
+  -mz_measure
+  #if " " in str($param_mz_measure):
+    "$param_mz_measure"
+  #else
+    $param_mz_measure
+  #end if
 #end if
 #if $param_mz_reference:
-  -mz_reference $param_mz_reference
+  -mz_reference
+  #if " " in str($param_mz_reference):
+    "$param_mz_reference"
+  #else
+    $param_mz_reference
+  #end if
 #end if
 #if $param_ignore_charge:
   -ignore_charge