--- a/IDDecoyProbability.xml	Mon Feb 12 08:43:29 2018 -0500
+++ b/IDDecoyProbability.xml	Wed May 15 05:32:48 2019 -0400
@@ -1,7 +1,7 @@
 <?xml version='1.0' encoding='UTF-8'?>
-<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.-->
+<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTDConverter.-->
 <!--Proposed Tool Section: [Utilities]-->
-<tool id="IDDecoyProbability" name="IDDecoyProbability" version="2.2.0">
+<tool id="IDDecoyProbability" name="IDDecoyProbability" version="2.3.0">
   <description>Estimates peptide probabilities using a decoy search strategy.
 WARNING: This util is deprecated.</description>
   <macros>
@@ -11,7 +11,7 @@
   <expand macro="references"/>
   <expand macro="stdio"/>
   <expand macro="requirements"/>
-  <command>IDDecoyProbability
+  <command detect_errors="aggressive"><![CDATA[IDDecoyProbability
 
 #if $param_in:
   -in $param_in
@@ -36,7 +36,7 @@
   -decoy_algorithm:lower_score_better_default_value_if_zero $adv_opts.param_decoy_algorithm_lower_score_better_default_value_if_zero
 #end if
 #end if
-</command>
+]]></command>
   <inputs>
     <param name="param_in" type="data" format="idxml" optional="True" label="Identification input of combined forward decoy search (reindex with PeptideIndexer first)" help="(-in) "/>
     <param name="param_fwd_in" type="data" format="idxml" optional="True" label="Identification input of forward run" help="(-fwd_in) "/>
@@ -54,5 +54,5 @@
 WARNING: This util is deprecated.
 
 
-For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_IDDecoyProbability.html</help>
+For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/UTILS_IDDecoyProbability.html</help>
 </tool>