Mercurial > repos > galaxyp > openms_idconflictresolver
diff IDConflictResolver.xml @ 12:f50773ab01f1 draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author | galaxyp |
---|---|
date | Wed, 15 May 2019 05:34:59 -0400 |
parents | 961008b5fe92 |
children | fff6bebbf7dc |
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--- a/IDConflictResolver.xml Mon Feb 12 08:44:04 2018 -0500 +++ b/IDConflictResolver.xml Wed May 15 05:34:59 2019 -0400 @@ -1,7 +1,7 @@ <?xml version='1.0' encoding='UTF-8'?> -<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.--> +<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTDConverter.--> <!--Proposed Tool Section: [ID Processing]--> -<tool id="IDConflictResolver" name="IDConflictResolver" version="2.2.0"> +<tool id="IDConflictResolver" name="IDConflictResolver" version="2.3.0"> <description>Resolves ambiguous annotations of features with peptide identifications</description> <macros> <token name="@EXECUTABLE@">IDConflictResolver</token> @@ -10,7 +10,7 @@ <expand macro="references"/> <expand macro="stdio"/> <expand macro="requirements"/> - <command>IDConflictResolver + <command detect_errors="aggressive"><![CDATA[IDConflictResolver #if $param_in: -in $param_in @@ -23,7 +23,7 @@ -force #end if #end if -</command> +]]></command> <inputs> <param name="param_in" type="data" format="featurexml,consensusxml" optional="False" label="Input file (data annotated with identifications)" help="(-in) "/> <expand macro="advanced_options"> @@ -36,5 +36,5 @@ <help>Resolves ambiguous annotations of features with peptide identifications -For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/TOPP_IDConflictResolver.html</help> +For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/TOPP_IDConflictResolver.html</help> </tool>