Mercurial > repos > galaxyp > openms_consensusid
diff ConsensusID.xml @ 12:d0054ea86673 draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author | galaxyp |
---|---|
date | Wed, 15 May 2019 06:01:05 -0400 |
parents | 379e2be979f8 |
children | 302780acadcf |
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--- a/ConsensusID.xml Mon Feb 12 08:52:57 2018 -0500 +++ b/ConsensusID.xml Wed May 15 06:01:05 2019 -0400 @@ -1,7 +1,7 @@ <?xml version='1.0' encoding='UTF-8'?> -<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.--> +<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTDConverter.--> <!--Proposed Tool Section: [ID Processing]--> -<tool id="ConsensusID" name="ConsensusID" version="2.2.0"> +<tool id="ConsensusID" name="ConsensusID" version="2.3.0"> <description>Computes a consensus of peptide identifications of several identification engines.</description> <macros> <token name="@EXECUTABLE@">ConsensusID</token> @@ -10,7 +10,7 @@ <expand macro="references"/> <expand macro="stdio"/> <expand macro="requirements"/> - <command>ConsensusID + <command detect_errors="aggressive"><![CDATA[ConsensusID #if $param_in: -in $param_in @@ -63,7 +63,7 @@ -force #end if #end if -</command> +]]></command> <inputs> <param name="param_in" type="data" format="idxml,featurexml,consensusxml" optional="False" label="input file" help="(-in) "/> <param name="param_rt_delta" type="float" min="0.0" optional="True" value="0.1" label="[idXML input only] Maximum allowed retention time deviation between identifications belonging to the same spectrum" help="(-rt_delta) "/> @@ -96,5 +96,5 @@ <help>Computes a consensus of peptide identifications of several identification engines. -For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/TOPP_ConsensusID.html</help> +For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/TOPP_ConsensusID.html</help> </tool>