comparison metaquantome_filter.xml @ 3:28180bbb8fe4 draft

planemo upload commit 3762c462ff510cccd856f4ccd7fb87c44ad9b4e7
author galaxyp
date Thu, 06 Dec 2018 08:50:19 -0500
parents 47bfbd6597d0
children 80ce9ca55697
comparison
equal deleted inserted replaced
2:a8cb3dea93a6 3:28180bbb8fe4
74 </inputs> 74 </inputs>
75 <outputs> 75 <outputs>
76 <data format="tabular" name="outfile" label="${tool.name} on ${on_string} filtered"/> 76 <data format="tabular" name="outfile" label="${tool.name} on ${on_string} filtered"/>
77 <expand macro="output_samples"/> 77 <expand macro="output_samples"/>
78 </outputs> 78 </outputs>
79 <tests>
80 <test>
81 <param name="expand_file" value="go_expanded.tab" ftype="tabular"/>
82 <param name="mode" value="f" />
83 <param name="ontology" value="go" />
84 <param name="samps_src" value="build" />
85 <repeat name="samps">
86 <param name="group_name" value="s1"/>
87 <param name="col_names" value="int1,int2,int3"/>
88 </repeat>
89 <repeat name="samps">
90 <param name="group_name" value="s2"/>
91 <param name="col_names" value="int4,int5,int6"/>
92 </repeat>
93 <param name="min_peptides" value="1" />
94 <param name="min_pep_nsamp" value="1" />
95 <param name="min_children_non_leaf" value="2" />
96 <param name="min_child_nsamp" value="1" />
97 <param name="qthreshold" value="2" />
98 <output name="outfile" file="go_filtered.tab" ftype="tabular"/>
99 </test>
100 </tests>
79 <help><![CDATA[ 101 <help><![CDATA[
80 TODO: Fill in help. 102 TODO: Fill in help.
81 ]]></help> 103 ]]></help>
82 <expand macro="citations" /> 104 <expand macro="citations" />
83 </tool> 105 </tool>