Mercurial > repos > galaxyp > maxquant

comparison test-data/01/config.yml @ 3:009693badefc draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit da342a782ccc391b87fb4fead956b7b3cbd21258"
author galaxyp
date Sat, 11 Apr 2020 15:48:19 +0000
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children 1cdde5989a2d
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2:33c911e66d8e 3:009693badefc
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2 fastaFiles: [/tmp/tmpQsmPD9/files/7/b/e/dataset_7be42b54-5eac-4f1d-a6bb-0b85e8f1bd67.dat]
3 parseRules:
4 identifierParseRule: '>([^\s]*)'
5 descriptionParseRule: '>(.*)'
6 minUniquePeptides: 0
7 minPepLen: 7
8 maxPeptideMass: 4600
9 calcPeakProperties: False
10 writeMzTab: True
11 separateLfq: False
12 lfqStabilizeLargeRatios: True
13 lfqRequireMsms: True
14 advancedSiteIntensities: True
15 matchBetweenRuns: False
16 paramGroups:
17 - files: ['BSA_min_23.mzXML']
18 maxMissedCleavages: 1
19 fixedModifications: [Carbamidomethyl (C)]
20 variableModifications: [Oxidation (M)]
21 enzymes: [Trypsin/P]
22