Mercurial > repos > galaxyp > maldi_quant_preprocessing

comparison maldi_macros.xml @ 4:82b1de5c142b draft default tip

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
author galaxyp
date Sat, 04 Mar 2023 19:13:31 +0000
parents aa81463e21ea
children
comparison
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3:aa81463e21ea 4:82b1de5c142b
1 <macros> 1 <macros>
2 <token name="@R_IMPORTS@"><![CDATA[ 2 <token name="@R_IMPORTS@"><![CDATA[
3 library (Cardinal)
4 library (MALDIquantForeign) 3 library (MALDIquantForeign)
5 library (MALDIquant) 4 library (MALDIquant)
6 library (ggplot2) 5 library (ggplot2)
7 library(gridExtra) 6 library(gridExtra)
8 ]]> 7 ]]>
12 MALDIquant_ provides a complete analysis pipeline for MALDI-TOF and other mass spectrometry data. 11 MALDIquant_ provides a complete analysis pipeline for MALDI-TOF and other mass spectrometry data.
13 So far we have only implemented the functionalities for mass spectrometry imaging data. 12 So far we have only implemented the functionalities for mass spectrometry imaging data.
14 ]]> 13 ]]>
15 </token> 14 </token>
16 15
17 <token name="@VERSION@">1.18.0</token> 16 <token name="@VERSION@">1.22.0</token>
18 17
19 <xml name="requirements"> 18 <xml name="requirements">
20 <requirements> 19 <requirements>
21 <requirement type="package" version="3.5.1">r-base</requirement> 20 <requirement type="package" version="4.2.2">r-base</requirement>
22 <requirement type="package" version="1.12.1">bioconductor-cardinal</requirement> 21 <requirement type="package" version="0.13">r-maldiquantforeign</requirement>
23 <requirement type="package" version="0.11.5">r-maldiquantforeign</requirement> 22 <requirement type="package" version="1.22">r-maldiquant</requirement>
24 <requirement type="package" version="1.18">r-maldiquant</requirement> 23 <requirement type="package" version="3.4.1">r-ggplot2</requirement>
25 <requirement type="package" version="3.0">r-ggplot2</requirement>
26 <requirement type="package" version="2.3">r-gridextra</requirement> 24 <requirement type="package" version="2.3">r-gridextra</requirement>
27 </requirements> 25 </requirements>
28 </xml> 26 </xml>
29 27
30 <xml name="citation"> 28 <xml name="citation">
31 <citations> 29 <citations>
32 <citation type="doi">10.1093/bioinformatics/bts447</citation> 30 <citation type="doi">10.1093/bioinformatics/bts447</citation>
33 <citation type="doi">10.1007/978-3-319-45809-0_6</citation> 31 <citation type="doi">10.1007/978-3-319-45809-0_6</citation>
32 <citation type="doi">10.1093/gigascience/giz143</citation>
34 </citations> 33 </citations>
35 </xml> 34 </xml>
36 </macros> 35 </macros>