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comparison delta_pi_calc.xml @ 2:c093af6f2a6c draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/pi_db_tools commit 71a4265d11aef48342142b8cf2caa86f79f9a554
author galaxyp
date Fri, 01 Sep 2017 03:14:37 -0400
parents 70757404c4f6
children a6341e757422
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1:70757404c4f6 2:c093af6f2a6c
1 <tool id="calc_delta_pi" name="Add delta pI" version="1.1"> 1 <tool id="calc_delta_pi" name="Add delta pI" version="1.2">
2 <description>to peptide table</description>
2 <requirements> 3 <requirements>
3 <requirement type="package" version="3.6">python</requirement> 4 <requirement type="package" version="3.6">python</requirement>
4 </requirements> 5 </requirements>
5 <description>to peptide table</description> 6 <command detect_errors="exit_code">
6 <command>
7 python '$__tool_directory__/peptide_pi_annotator.py' -i '$trainingpi' -p '$peptable' --out '$output' 7 python '$__tool_directory__/peptide_pi_annotator.py' -i '$trainingpi' -p '$peptable' --out '$output'
8 #if $stripcol 8 #if $stripcol
9 --stripcol $stripcol 9 --stripcol $stripcol
10 #else if $stripcolpattern 10 #else if $stripcolpattern
11 --stripcolpattern '$stripcolpattern' 11 --stripcolpattern '$stripcolpattern'