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comparison msfragger_macros.xml @ 5:e06c94fe89cc draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 1dd092b0008017e57b66775f1763f824d100ca08
author galaxyp
date Sat, 01 Feb 2025 18:11:56 +0000
parents 41990c43f371
children 59fec1e2a6c3
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4:e58fb5e6790a 5:e06c94fe89cc
984 <!-- Composes all parameter tokens for generating msfragger_dict for --> 984 <!-- Composes all parameter tokens for generating msfragger_dict for -->
985 <token name="@MSFRAGGER_PARAM_DICT@"><![CDATA[ 985 <token name="@MSFRAGGER_PARAM_DICT@"><![CDATA[
986 #import re 986 #import re
987 #set $msfragger_dict = {} 987 #set $msfragger_dict = {}
988 @SEARCH_TOLERANCES@ 988 @SEARCH_TOLERANCES@
989 @DIGESTION@
989 ## Variable Modification Parameters sets $vmods 990 ## Variable Modification Parameters sets $vmods
990 @VARIABLE_MODIFICATION@ 991 @VARIABLE_MODIFICATION@
991 ## Static Modification Parameters sets $fmods 992 ## Static Modification Parameters sets $fmods
992 @STATIC_MODIFICATION@ 993 @STATIC_MODIFICATION@
993 @GLYCO_LABILE@ 994 @GLYCO_LABILE@