# HG changeset patch
# User galaxyp
# Date 1431368447 14400
# Node ID 25f43048bff37c6ce6df71a40c424479779e433e
# Parent  7b4d70c9a1392f837c71ad5887782879311c749e
Uploaded

diff -r 7b4d70c9a139 -r 25f43048bff3 feature_alignment.xml
--- a/feature_alignment.xml	Mon May 11 12:20:44 2015 -0400
+++ b/feature_alignment.xml	Mon May 11 14:20:47 2015 -0400
@@ -48,10 +48,9 @@
             label="Maximal difference in RT for two isotopic channels in the same run" help="(--iso_max_rt_diff)" />
         <param name="frac_selected" type="float" value="0.0" min="0" max="1"
             label="Do not write peakgroup if selected in less than this fraction of runs" help="(--frac_selected)"/>
-
         <param name="method" type="select"
             label="Which method to use for the clustering"
-            help="Note that the MST options will perform a local, MST guided alignment while the other options will use a reference-guided alignment. The global option will also move peaks which are below the selected FDR threshold. (--method)" />
+            help="Note that the MST options will perform a local, MST guided alignment while the other options will use a reference-guided alignment. The global option will also move peaks which are below the selected FDR threshold. (--method)" >
             <option value='best_overall' selected="True">best_overall</option>
             <option value='best_cluster_score'>best_cluster_score</option>
             <option value='global_best_cluster_score'>global_best_cluster_score</option>