Mercurial > repos > galaxyp > custom_pro_db_annotation_data_manager

comparison data_manager_conf.xml @ 3:af0a098e15bd draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/data_manager_customProDB commit 141369f97aa2804d2bbfd9ed620ea2a5574994c2-dirty
author galaxyp
date Wed, 27 Jan 2016 16:46:54 -0500
parents 663ee21a8609
children 9fec6c7f46eb
comparison
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2:20a1b026b798 3:af0a098e15bd
8 <column name="dbkey" /> 8 <column name="dbkey" />
9 <column name="name" /> 9 <column name="name" />
10 <column name="path" output_ref="out_file" > 10 <column name="path" output_ref="out_file" >
11 <move type="directory" relativize_symlinks="True"> 11 <move type="directory" relativize_symlinks="True">
12 <!-- <source>${path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base --> 12 <!-- <source>${path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base -->
13 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/customProDB/${value}</target> 13 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/customProDB</target>
14 </move> 14 </move>
15 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/customProDB/${value}/${path}</value_translation> 15 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/customProDB</value_translation>
16 <value_translation type="function">abspath</value_translation> 16 <value_translation type="function">abspath</value_translation>
17 </column> 17 </column>
18 </output> 18 </output>
19 </data_table> 19 </data_table>
20 </data_manager> 20 </data_manager>