Mercurial > repos > galaxyp > custom_pro_db

comparison customProDB.xml @ 5:6db27bef602f draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/customProDB commit 141369f97aa2804d2bbfd9ed620ea2a5574994c2-dirty
author galaxyp
date Fri, 29 Jan 2016 16:03:10 -0500
parents 7e078d4e40f8
children 61e45c111ef7
comparison
equal deleted inserted replaced
4:5bf19713c281 5:6db27bef602f
1 <tool id="custom_pro_db" name="CustomProDB" version="1.10.0"> 1 <tool id="custom_pro_db" name="CustomProDB" version="1.10.0">
2 <description>Generate protein FASTAs from exosome or transcriptome data</description> 2 <description>Generate protein FASTAs from exosome or transcriptome data</description>
3 <stdio> 3 <stdio>
4 <exit_code range="1:" level="fatal" description="Job Failed" /> 4 <exit_code range="1:" level="fatal" description="Job Failed" />
5 </stdio> 5 </stdio>
6 <command interpreter="Rscript --vanilla">PSM2SAM.R 6 <command interpreter="Rscript --vanilla">customProDB.R
7 7
8 --bam="$bamInput" 8 --bam="$bamInput"
9 --vcf="$vcfInput" 9 --vcf="$vcfInput"
10 --outputFile="$output" 10 --outputFile="$output"
11 11