Mercurial > repos > galaxyp > cardinal_preprocessing
comparison preprocessing.xml @ 5:84f422579d39 draft
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
| author | galaxyp |
|---|---|
| date | Fri, 13 Dec 2019 18:50:20 +0000 |
| parents | 58fb63423b0b |
| children | cbd9e4df377d |
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| 4:58fb63423b0b | 5:84f422579d39 |
|---|---|
| 492 <when value="align_noref"/> | 492 <when value="align_noref"/> |
| 493 <when value="align_table"> | 493 <when value="align_table"> |
| 494 <expand macro="reading_1_column_mz_tabular" label="Tabular file with m/z features to use for alignment. Only the m/z values from the tabular file will be kept."/> | 494 <expand macro="reading_1_column_mz_tabular" label="Tabular file with m/z features to use for alignment. Only the m/z values from the tabular file will be kept."/> |
| 495 </when> | 495 </when> |
| 496 <when value="align_msidata_ref"> | 496 <when value="align_msidata_ref"> |
| 497 <param name="align_peaks_msidata" type="data" format="rdata," label="Picked and aligned Cardinal MSImageSet saved as RData"/> | 497 <param name="align_peaks_msidata" type="data" format="rdata" label="Picked and aligned Cardinal MSImageSet saved as RData"/> |
| 498 </when> | 498 </when> |
| 499 </conditional> | 499 </conditional> |
| 500 </when> | 500 </when> |
| 501 <when value="Peak_filtering"> | 501 <when value="Peak_filtering"> |
| 502 <param name="frequ_filtering" type="integer" value="1000" | 502 <param name="frequ_filtering" type="integer" value="1000" |
| 541 </param> | 541 </param> |
| 542 <when value="table"> | 542 <when value="table"> |
| 543 <expand macro="reading_1_column_mz_tabular" label="Tabular file with m/z features to extract from input file"/> | 543 <expand macro="reading_1_column_mz_tabular" label="Tabular file with m/z features to extract from input file"/> |
| 544 </when> | 544 </when> |
| 545 <when value="msidata_ref"> | 545 <when value="msidata_ref"> |
| 546 <param name="peaks_msidata" type="data" format="rdata," label="Picked and aligned Cardinal MSImageSet saved as RData"/> | 546 <param name="peaks_msidata" type="data" format="rdata" label="Picked and aligned Cardinal MSImageSet saved as RData"/> |
| 547 </when> | 547 </when> |
| 548 </conditional> | 548 </conditional> |
| 549 </when> | 549 </when> |
| 550 </conditional> | 550 </conditional> |
| 551 </when> | 551 </when> |