Mercurial > repos > fubar > shrnaseq_test

comparison tool_dependencies.xml @ 7:2c6bcbc1e76a draft default tip

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author fubar
date Mon, 19 Jan 2015 22:14:10 -0500
parents e7922416086d
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6:c1b3da0fde4a 7:2c6bcbc1e76a
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="R" version="3.1.2">
4 <repository changeset_revision="f0626dac6765" name="package_r_3_1_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
5 </package>
6 <package name="shrnaseq_r" version="0.1">
7 <install version="1.0">
8 <actions>
9 <action type="setup_r_environment">
10 <repository changeset_revision="f0626dac6765" name="package_r_3_1_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
11 <package name="R" version="3.1.2" />
12 </repository>
13 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/locfit_1.5-9.1.tar.gz?raw=true</package>
14 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/limma_3.22.4.tar.gz?raw=true</package>
15 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/edgeR_3.8.5.tar.gz?raw=true</package>
16 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/statmod_1.4.20.tar.gz?raw=true</package>
17 </action>
18 <action type="chmod">
19 <file mode="755">$REPOSITORY_INSTALL_DIR/hairpinTool.R</file>
20 </action>
21 <action type="set_environment">
22 <environment_variable action="set_to" name="HAIRPINTOOL_R_SOURCE">$REPOSITORY_INSTALL_DIR/hairpinTool.R</environment_variable>
23 </action>
24 </actions>
25 </install>
26 </package>
27 <readme>
28 </readme>
29 </tool_dependency>