Mercurial > repos > fubar > rg_gsea

diff gseaGMT_3.1_symbols.loc.sample @ 1:f24f30eae819 draft

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author fubar
date Sun, 09 Jun 2013 02:00:04 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/gseaGMT_3.1_symbols.loc.sample	Sun Jun 09 02:00:04 2013 -0400
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+# generated by makeGSEAloc.py at 24/01/2013 10:43:16 from path = /data/genomes/gsea/3.1
+# loc file for the rgGSEA tool pointing to files from ftp://gseaftp.broadinstitute.org/pub/gsea/annotations
+# name value path
+c1.all.v3.1.symbols c1.all.v3.1.symbols /data/genomes/gsea/3.1/c1.all.v3.1.symbols.gmt
+c2.all.v3.1.symbols c2.all.v3.1.symbols /data/genomes/gsea/3.1/c2.all.v3.1.symbols.gmt
+c2.cgp.v3.1.symbols c2.cgp.v3.1.symbols /data/genomes/gsea/3.1/c2.cgp.v3.1.symbols.gmt
+c2.cp.biocarta.v3.1.symbols c2.cp.biocarta.v3.1.symbols /data/genomes/gsea/3.1/c2.cp.biocarta.v3.1.symbols.gmt
+c2.cp.kegg.v3.1.symbols c2.cp.kegg.v3.1.symbols /data/genomes/gsea/3.1/c2.cp.kegg.v3.1.symbols.gmt
+c2.cp.reactome.v3.1.symbols c2.cp.reactome.v3.1.symbols /data/genomes/gsea/3.1/c2.cp.reactome.v3.1.symbols.gmt
+c2.cp.v3.1.symbols  c2.cp.v3.1.symbols   /data/genomes/gsea/3.1/c2.cp.v3.1.symbols.gmt
+c3.all.v3.1.symbols c3.all.v3.1.symbols /data/genomes/gsea/3.1/c3.all.v3.1.symbols.gmt
+c3.mir.v3.1.symbols c3.mir.v3.1.symbols /data/genomes/gsea/3.1/c3.mir.v3.1.symbols.gmt
+c3.tft.v3.1.symbols c3.tft.v3.1.symbols /data/genomes/gsea/3.1/c3.tft.v3.1.symbols.gmt
+c4.all.v3.1.symbols c4.all.v3.1.symbols /data/genomes/gsea/3.1/c4.all.v3.1.symbols.gmt
+c4.cgn.v3.1.symbols c4.cgn.v3.1.symbols /data/genomes/gsea/3.1/c4.cgn.v3.1.symbols.gmt
+c4.cm.v3.1.symbols  c4.cm.v3.1.symbols   /data/genomes/gsea/3.1/c4.cm.v3.1.symbols.gmt
+c5.all.v3.1.symbols c5.all.v3.1.symbols /data/genomes/gsea/3.1/c5.all.v3.1.symbols.gmt
+c5.bp.v3.1.symbols  c5.bp.v3.1.symbols   /data/genomes/gsea/3.1/c5.bp.v3.1.symbols.gmt
+c5.cc.v3.1.symbols  c5.cc.v3.1.symbols   /data/genomes/gsea/3.1/c5.cc.v3.1.symbols.gmt
+c5.mf.v3.1.symbols  c5.mf.v3.1.symbols   /data/genomes/gsea/3.1/c5.mf.v3.1.symbols.gmt
+c6.all.v3.1.symbols c6.all.v3.1.symbols /data/genomes/gsea/3.1/c6.all.v3.1.symbols.gmt
+msigdb.v3.1.symbols msigdb.v3.1.symbols /data/genomes/gsea/3.1/msigdb.v3.1.symbols.gmt
+