Mercurial > repos > fubar > htseq_bams_to_count_matrix

comparison tool_dependencies.xml @ 64:d300bc688e95 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/htseq commit e5a5ad091c621348dc6ce2df861475ebc54a380e
author iuc
date Tue, 13 Oct 2015 17:24:08 -0400
parents e34313b3898b
children
comparison
equal deleted inserted replaced
63:e34313b3898b 64:d300bc688e95
2 <tool_dependency> 2 <tool_dependency>
3 <package name="pysam" version="0.7.6"> 3 <package name="pysam" version="0.7.6">
4 <repository changeset_revision="247e5e5bee87" name="package_pysam_0_7_6" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 4 <repository changeset_revision="247e5e5bee87" name="package_pysam_0_7_6" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
5 </package> 5 </package>
6 <package name="matplotlib" version="1.2.1"> 6 <package name="matplotlib" version="1.2.1">
7 <repository changeset_revision="55a75739919b" name="package_matplotlib_1_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 7 <repository changeset_revision="de13f10b590f" name="package_matplotlib_1_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
8 </package> 8 </package>
9 <package name="htseq" version="0.5.4p3"> 9 <package name="htseq" version="0.5.4p3">
10 <install version="1.0"> 10 <install version="1.0">
11 <actions> 11 <actions>
12 <action type="download_by_url">https://pypi.python.org/packages/source/H/HTSeq/HTSeq-0.6.1.tar.gz</action> 12 <action type="download_by_url">https://pypi.python.org/packages/source/H/HTSeq/HTSeq-0.6.1.tar.gz</action>
13 <action type="set_environment_for_install"> 13 <action type="set_environment_for_install">
14 <repository changeset_revision="247e5e5bee87" name="package_pysam_0_7_6" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 14 <repository changeset_revision="247e5e5bee87" name="package_pysam_0_7_6" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
15 <package name="pysam" version="0.7.6" /> 15 <package name="pysam" version="0.7.6" />
16 </repository> 16 </repository>
17 <repository changeset_revision="55a75739919b" name="package_matplotlib_1_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 17 <repository changeset_revision="de13f10b590f" name="package_matplotlib_1_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
18 <package name="matplotlib" version="1.2.1" /> 18 <package name="matplotlib" version="1.2.1" />
19 </repository> 19 </repository>
20 </action> 20 </action>
21 <action type="make_directory">$INSTALL_DIR/lib/python</action> <!-- Not sure why these must be made apriori, but install fails otherwise --> 21 <action type="make_directory">$INSTALL_DIR/lib/python</action> <!-- Not sure why these must be made apriori, but install fails otherwise -->
22 <action type="make_directory">$INSTALL_DIR/lib64/python</action> <!-- Not sure why these must be made apriori, but install fails otherwise --> 22 <action type="make_directory">$INSTALL_DIR/lib64/python</action> <!-- Not sure why these must be made apriori, but install fails otherwise -->