--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/FastQC/tool_dependencies.xml	Tue Jun 04 00:01:51 2013 -0400
@@ -0,0 +1,21 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="fastqc" version="0.10.1">
+        <install version="1.0">
+            <actions>
+                <action type="download_by_url">http://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.10.1.zip</action>
+                <action type="move_directory_files">
+                    <source_directory>FastQC</source_directory>
+                    <destination_directory>$INSTALL_DIR/FastQC</destination_directory>
+                </action>                
+                <action type="shell_command">chmod ugo+x $INSTALL_DIR/FastQC/fastqc</action>
+                <action type="set_environment">
+                    <environment_variable name="FASTQC_BINARY_PATH" action="set_to">$INSTALL_DIR/FastQC/fastqc</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>You need a working unzip command line executable to install this tool and a suitable working Java run time environment 
+                available to all potential execution nodes for this tool to work.
+                Please see http://www.bioinformatics.babraham.ac.uk/projects/fastqc for all FastQC documentation</readme>
+    </package>
+</tool_dependency>